Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899245.1_cds_XP_016449227.1_43802
CDS Infomation

[gene=LOC107774246] [db_xref=GeneID:107774246] [protein=pentatricopeptide repeat-containing protein At5g56310-like] [protein_id=XP_016449227.1] [location=complement(44803..45864)] [gbkey=CDS]
Sequence

ATGGATACTGCGAAGTACTTGTTTGATAATATACCGGAGAAGAATGTTATTTCTTGGACT
ACCATAATTGCGGGGTATGCTCAGGTGAATCAATTTTCTCAAGCTATTGGTGTTTTCCGT
GAAATGATGAGTGCAGAAGTTGGTGTCAAGCCTGATGAGGTAACAATGCTAGCTGTGCTT
TCTGCTTGTGCCCACTTGGGTGAGCTTGAGTTGGGCGAATGGATCCATAGTTATATTATA
AAACACAGGTTATGCAGAACTGTGCCTCTTAACAATGCCCTTATTGATATGTATGCAAAA
TCGGGGAATGTGAAGAAGGGAGTAAAATTGTTTGAGAGCATGGAAACAAGGAGTGTTGTT
TCTTGGTCAACAATGATTTCTGCATTGGCTGTCAATGGGTATGGACGAGAAGCGCTTAAC
ATGTTTTCTCGAATGGAAATGGTTGGAATTAGGCCGAACAGTATCACCTTAATAGCAGTA
CTATCTGCATGTAGCCATGCAGGTCTTGTGGAGGAGGGCAGATTGTATTTTAAGATAATG
GAAGAAAAATATGGTATTAGTCCTGACATCAGACACTATGGTTGCATGGTCGATCTTTTA
GGGCGTGCAGATTACCTCGACGAGGCTGTAAACCTGATTAAAACGATGCCCTTTGAAGCA
AATGCAGTGATTTGGGGATCACTTCTTGCTGCAGCCAAGAAGCAAAGTCATGTTGAACTT
GGGGAGCAAGCACTGCAGCATCTAACTGAAGTGGAACCACGTAACAGTGGGAATTATTCC
CTTGTGTCCAATACATATGCTGCTCTTGGTAGGTGGAGTGAAGCTAGGGTAGCAAGAAAG
ATCATGAGGGACACAGGTGTCAAAAAGTTGCCAGGCGGTAGCTTCATCAAGGTGAAAAAC
AGAGTTTATTACTTCTATTCAGGAGACAGATCACATTCTCAATGCGAGAGGATATACAGA
ATTCTATCGCAGTTGAATAAGGTATCAAAGACGGTATTGAATGAGGATTGGGGATATGAA
GAGCTGCTTGATGCTGATAACCTTTACGAGGATCACTTGTAA

Peptide Sequence

PEP ID

XP_016449227.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Nicotiana tabacum]
Sequence

MDTAKYLFDNIPEKNVISWTTIIAGYAQVNQFSQAIGVFREMMSAEVGVKPDEVTMLAVL
SACAHLGELELGEWIHSYIIKHRLCRTVPLNNALIDMYAKSGNVKKGVKLFESMETRSVV
SWSTMISALAVNGYGREALNMFSRMEMVGIRPNSITLIAVLSACSHAGLVEEGRLYFKIM
EEKYGISPDIRHYGCMVDLLGRADYLDEAVNLIKTMPFEANAVIWGSLLAAAKKQSHVEL
GEQALQHLTEVEPRNSGNYSLVSNTYAALGRWSEARVARKIMRDTGVKKLPGGSFIKVKN
RVYYFYSGDRSHSQCERIYRILSQLNKVSKTVLNEDWGYEELLDADNLYEDHL

Transcript Sequence

Gene sequence data has not been registered.